MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Pasteurella sp.
19428wF3_WM03
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 32
bases: 2,266,646 bps
CDS: 2,120
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 2,180
Total number of protein coding genes annotated/found:
2,120
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5022|JADGKV010000003.1
SEQF5022_01090
Genome Viewer
NA
AA
2088/696
1140-3227
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01091
Genome Viewer
NA
AA
882/294
4549-3668
Outer membrane protein A
SEQF5022|JADGKV010000003.1
SEQF5022_01092
Genome Viewer
NA
AA
465/155
5146-5610
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01093
Genome Viewer
NA
AA
738/246
6431-5694
Hemin import ATP-binding protein HmuV
SEQF5022|JADGKV010000003.1
SEQF5022_01094
Genome Viewer
NA
AA
975/325
7398-6424
Hemin transport system permease protein HmuU
SEQF5022|JADGKV010000003.1
SEQF5022_01095
Genome Viewer
NA
AA
801/267
8282-7482
hypothetical protein
SEQF5022|JADGKV010000003.1
SEQF5022_01096
Genome Viewer
NA
AA
342/114
8469-8810
putative protein
SEQF5022|JADGKV010000003.1
SEQF5022_01097
Genome Viewer
NA
AA
468/156
9319-8852
Surface-adhesin protein E
SEQF5022|JADGKV010000003.1
SEQF5022_01098
Genome Viewer
NA
AA
741/247
10098-9358
Pyruvate formate-lyase 1-activating enzyme
SEQF5022|JADGKV010000003.1
SEQF5022_01099
Genome Viewer
NA
AA
2313/771
12531-10219
Formate acetyltransferase 1
SEQF5022|JADGKV010000003.1
SEQF5022_01100
Genome Viewer
NA
AA
852/284
13426-12575
putative formate transporter 1
SEQF5022|JADGKV010000003.1
SEQF5022_01101
Genome Viewer
NA
AA
351/117
13974-13624
50S ribosomal protein L19
SEQF5022|JADGKV010000003.1
SEQF5022_01102
Genome Viewer
NA
AA
738/246
14865-14128
tRNA (guanine-N(1)-)-methyltransferase
SEQF5022|JADGKV010000003.1
SEQF5022_01103
Genome Viewer
NA
AA
528/176
15448-14921
Ribosome maturation factor RimM
SEQF5022|JADGKV010000003.1
SEQF5022_01104
Genome Viewer
NA
AA
249/83
15727-15479
30S ribosomal protein S16
SEQF5022|JADGKV010000003.1
SEQF5022_01105
Genome Viewer
NA
AA
1350/450
17311-15962
NADP-specific glutamate dehydrogenase
SEQF5022|JADGKV010000003.1
SEQF5022_01106
Genome Viewer
NA
AA
1023/341
18557-17535
Delta-aminolevulinic acid dehydratase
SEQF5022|JADGKV010000003.1
SEQF5022_01107
Genome Viewer
NA
AA
771/257
19383-18613
Sec-independent protein translocase protein TatC
SEQF5022|JADGKV010000003.1
SEQF5022_01108
Genome Viewer
NA
AA
555/185
19947-19393
Sec-independent protein translocase protein TatB
SEQF5022|JADGKV010000003.1
SEQF5022_01109
Genome Viewer
NA
AA
231/77
20181-19951
Sec-independent protein translocase protein TatA
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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